Protein ZmOrphan99 | |
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Information | |
Orphans Name: | ZmOrphan99 |
Species: | Maize |
Orphans Family: | Orphans |
Gene Name(Synonym): | |
Uniprot ID: | B4F7V3 |
Subgenome: | 1 |
ZmOrphan99 is a protein in the Orphans family.
Overview of domains present in v5 transcripts | |
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PF00481 | |
Zm00001eb322340_T001 | |
Zm00001eb322340_T002 |
Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
---|---|---|---|---|---|
Zm00001d021582 | DAPseq | sequence | fimo | position | |
Zm00001d021582 | DAPseq | sequence | fimo | position | |
Zm00001d021582 | ChIPseq | sequence | fimo | position | |
Zm00001d021582 | PChIPseq | sequence | fimo | position |
MAGKEILHKVKDKVKDAFSSSGPETGKGKTKLSGKRVKHGYHLVKGKSNHPMEDYLVAEYRQVGEHDLGLFAIFDGHLGH
TVPDFLSSHLFNNILSEPEFLSDPETAIRNAYQLTDQKILENAAELGRGGSTAVTAILIGSDKFVKLVVANVGDSRAVIS
KNGVAKQLSVDHEPNMERQTIEQKGGFVSNLPGDVPRVDGQLAVARAFGDRSLKKHLSSDPYVVEQTIDENTEFLILASD
GLWKVMSNQEAVDEIKDCKDAQAAAKHLTEQAVNRKSKDDISVIVVKFMC
MAGKEILHKVKDKVKDAFSSSGPETGKGKTKLSGKRVKHGYHLVKGKSNHPMEDYLVAEYRQVGEHDLGLFAIFDGHLGH
TVPDFLSSHLFNNILSEPEFLSDPETAIRNAYQLTDQKILENAAELGRGGSTAVTAILIGSDKFVKLVVANVGDSRAVIS
KNGVAKQLSVDHEPNMERQTIEQKGGFVSNLPGDVPRVDGQLAVARAFGDRSLKKHLSSDPYVVEQTIDENTEFLILASD
GLWKVMSNQEAVDEIKDCKDAQAAAKHLTEQAVNRKSKDDISVIVVKFMC
MAGKEILHKVKDKVKDAFSSSGPETGKGKTKLSGKRVKHGYHLVKGKSNHPMEDYLVAEYRQVGEHDLGLFAIFDGHLGH
TVPDFLSSHLFNNILSEPEFLSDPETAIRNAYQLTDQKILENAAELGRGGSTAVTAILIGSDKFVKLVVANVGDSRAVIS
KNGVAKQLSVDHEPNMERQTIEQKGGFVSNLPGDVPRVDGQLAVARAFGDRSLKKHLSSDPYVVEQTIDENTEFLILASD
GLWKVMSNQEAVDEIKDCKDAQAAAKHLTEQAVNRKSKDDISVIVVKFMC
MAGKEILHKVKDKVKDAFSSSGPETGKGKTKLSGKRVKHGYHLVKGKSNHPMEDYLVAEYRQVGEHDLGLFAIFDGHLGH
TVPDFLSSHLFNNILSEPEFLSDPETAIRNAYQLTDQKILENAAELGRGGSTAVTAILIGSDKFVKLVVANVGDSRAVIS
KNGVAKQLSVDHEPNMERQTIEQKGGFVSNLPGDVPRVDGQLAVARAFGDRSLKKHLSSDPYVVEQTIDENTEFLILASD
GLWKVMSNQEAVDEIKDCKDAQAAAKHLTEQAVNRKSKDDISVIVVKFMC
MAGKEILHKVKDKVKDAFSSSGPETGKGKTKLSGKRVKHGYHLVKGKSNHPMEDYLVAEYRQVGEHDLGLFAIFDGHLGH
TVPDFLSSHLFNNILSEPEFLSDPETAIRNAYQLTDQKILENAAELGRGGSTAVTAILIGSDKFVKLVVANVGDSRAVIS
KNGVAKQLSVDHEPNMERQTIEQKGGFVSNLPGDVPRVDGQLAVARAFGDRSLKKHLSSDPYVVEQTIDENTEFLILASD
GLWKVMSNQEAVDEIKDCKDAQAAAKHLTEQAVNRKSKDDISVIVVKFMC
Secondary Structure Color Code | |
---|---|
BEND | region with high backbone curvature without specific hydrogen bonding |
HELX_LH_PP_P | left-handed polyproline helix |
HELX_RH_3T_P | right-handed 3-10 helix |
HELX_RH_AL_P | right-handed alpha helix |
HELX_RH_PI_P | right-handed pi helix |
STRN | beta strand |
TURN_TY1_P | type I turn |
UNDETERMINED | no data available |
Domains Present | |
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PF00481 |
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Hover here to show all domains |
ATCCTGGTCTAGCTTGTCGATCTCT...
ATCCTGGTCTAGCTTGTCGATCTCTCCTGTGAAACACGGAAAGGGAAGGCTGAAAAAACACGACGCTTTTTCTCCATGGTTTGGTGTGCATTTCCTCTCTCCTGTCCCCACTTGACACATCCATGTCCCAATCTCCCCCAACCTCAGGTCAACCGCCGCTACCCAAGATCCAGTCTCCGTTCTCCCTCTCCTCTCGCTTCATACACACCAGGGCGGCAGCGGCAGCGGCAGGGGCCCGCCATCACCAACCCACCTCCCTTCAATTATAAACCTATAAAATATCATCATTGACCCAAGCTGAGGCGACTAGTGGGTATTGATTTTTGGTGGGGCAGATCAAGGAGGGGGGGAGGGGGTTAACTTCCAAGGAACCAGTTCATTGCTGGTTCTGCTAGCAGGAGGTTGGATTTCAGAGGCAGAAGCTTTCAGCCAGGCGGGCTCAGGGCGCGGGCACATCAATGGCTGGCAAGGAAATCCTCCACAAGGTGAAGGACAAGGTGAAAGATGCATTTAGTTCATCAGGACCAGAAACAGGGAAAGGCAAGACAAAGTTATCAGGCAAGCGTGTCAAGCATGGTTACCATCTGGTGAAGGGCAAATCTAATCATCCAATGGAGGATTATCTAGTGGCAGAGTACCGGCAAGTTGGTGAACATGATTTGGGATTGTTTGCTATATTCGATGGTCACCTGGGCCACACTGTTCCAGACTTTTTGAGCTCCCATCTTTTCAATAACATCTTGAGTGAGCCAGAATTCTTGAGTGATCCAGAAACTGCTATCCGAAACGCATACCAACTTACGGATCAGAAGATATTGGAAAACGCAGCAGAGTTGGGAAGAGGTGGCTCCACAGCTGTTACTGCCATCTTAATAGGAAGTGACAAGTTCGTGAAACTAGTTGTTGCAAATGTTGGGGATTCACGGGCAGTTATTAGCAAGAACGGTGTAGCGAAGCAGCTTTCAGTTGACCATGAACCAAACATGGAGCGACAAACGATCGAGCAGAAGGGTGGCTTTGTATCAAACCTACCGGGTGATGTGCCACGTGTTGATGGGCAGCTGGCAGTTGCAAGGGCATTTGGAGACCGGAGCTTGAAGAAGCACCTCAGCTCTGATCCATATGTGGTCGAGCAAACTATCGATGAAAATACTGAGTTTTTAATTCTAGCAAGTGATGGCTTGTGGAAGGTGATGTCCAACCAGGAGGCTGTCGACGAGATCAAGGATTGCAAGGACGCGCAGGCAGCTGCCAAGCACCTGACGGAGCAGGCCGTGAATCGGAAGAGCAAAGACGACATTTCAGTTATCGTAGTCAAGTTCATGTGCTAGCACATCGTCAGGTTAAATGGTCTCCCGATTGTATACCGTGTTAAATTATCTTTTAAGTCTTGTGCTCGCTGGTGTCGGACATTTTGTTTACCTTCTTTGGTTTTGGGACCCCACAAAGAGGGTCAAGGCTTGTAACATATTGTTGTTTGTTTAAGGCTCCAAATAAAGCATGGTACCACCATAGTAATTTCAGTTCGTGTTCTTAC
MAGKEILHKVKDKVKDAFSSSGPETGKGKTKLSGKRVKHGYHLVKGKSNHPMEDYLVAEYRQVGEHDLGLFAIFDGHLGH
TVPDFLSSHLFNNILSEPEFLSDPETAIRNAYQLTDQKILENAAELGRGGSTAVTAILIGSDKFVKLVVANVGDSRAVIS
KNGVAKQLSVDHEPNMERQTIEQKGGFVSNLPGDVPRVDGQLAVARAFGDRSLKKHLSSDPYVVEQTIDENTEFLILASD
GLWKVMSNQEAVDEIKDCKDAQAAAKHLTEQAVNRKSKDDISVIVVKFMC
ACGACGCTTTTTCTCCATGGTTTGG...
ACGACGCTTTTTCTCCATGGTTTGGTGTGCATTTCCTCTCTCCTGTCCCCACTTGACACATCCATGTCCCAATCTCCCCCAACCTCAGGTCAACCGCCGCTACCCAAGATCCAGTCTCCGTTCTCCCTCTCCTCTCGCTTCATACACACCAGGGCGGCAGCGGCAGCGGCAGGGGCCCGCCATCACCAACCCACCTCCCTTCAATTATAAACCTATAAAATATCATCATTGACCCAAGCTGAGGCGACTAGTGGGTATTGATTTTTGGTGGGGCAGATCAAGGAGGGGGGGAGGGGGTTAACTTCCAAGGAACCAGTTCATTGCTGGTTCTGCTAGCAGGAGGTTGGATTTCAGAGGCAGAAGCTTTCAGCCAGGCGGGCTCAGGGCGCGGGCACATCAATGGCTGGCAAGGAAATCCTCCACAAGGTGAAGGACAAGGTGAAAGATGCATTTAGTTCATCAGGACCAGAAACAGGGAAAGGCAAGACAAAGTTATCAGGCAAGCGTGTCAAGCATGGTTACCATCTGGTGAAGGGCAAATCTAATCATCCAATGGAGGATTATCTAGTGGCAGAGTACCGGCAAGTTGGTGAACATGATTTGGGATTGTTTGCTATATTCGATGGTCACCTGGGCCACACTGTTCCAGACTTTTTGAGCTCCCATCTTTTCAATAACATCTTGAGTGAGCCAGAATTCTTGAGTGATCCAGAAACTGCTATCCGAAACGCATACCAACTTACGGATCAGAAGATATTGGAAAACGCAGCAGAGTTGGGAAGAGGTGGCTCCACAGCTGTTACTGCCATCTTAATAGGAAGTGACAAGTTCGTGAAACTAGTTGTTGCAAATGTTGGGGATTCACGGGCAGTTATTAGCAAGAACGGTGTAGCGAAGCAGCTTTCAGTTGACCATGAACCAAACATGGAGCGACAAACGATCGAGCAGAAGGGTGGCTTTGTATCAAACCTACCGGGTGATGTGCCACGTGTTGATGGGCAGCTGGCAGTTGCAAGGGCATTTGGAGACCGGAGCTTGAAGAAGCACCTCAGCTCTGATCCATATGTGGTCGAGCAAACTATCGATGAAAATACTGAGTTTTTAATTCTAGCAAGTGATGGCTTGTGGAAGGTGATGTCCAACCAGGAGGCTGTCGACGAGATCAAGGATTGCAAGGACGCGCAGGCAGCTGCCAAGCACCTGACGGAGCAGGCCGTGAATCGGAAGAGCAAAGACGACATTTCAGTTATCGTAGTCAAGTTCATGTGCTAGCACATCGTCAGGTTAAATGGTCTCCCGATTGTATACCGTGTTAAATTATCTTTTAAGTCTTGTGCTCGCTGGTGTCGGACATTTTGTTTACCTTCTTTGGTTTTGGGACCCCACAAAGAGGGTCAAGGCTTGTAACATATTGTTGTTTGTTTAAGGCTCCAAATAAAGCATGGTACCACCATAGTAATTTCA
MAGKEILHKVKDKVKDAFSSSGPETGKGKTKLSGKRVKHGYHLVKGKSNHPMEDYLVAEYRQVGEHDLGLFAIFDGHLGH
TVPDFLSSHLFNNILSEPEFLSDPETAIRNAYQLTDQKILENAAELGRGGSTAVTAILIGSDKFVKLVVANVGDSRAVIS
KNGVAKQLSVDHEPNMERQTIEQKGGFVSNLPGDVPRVDGQLAVARAFGDRSLKKHLSSDPYVVEQTIDENTEFLILASD
GLWKVMSNQEAVDEIKDCKDAQAAAKHLTEQAVNRKSKDDISVIVVKFMC
ACGACGCTTTTTCTCCATGGTTTGG...
ACGACGCTTTTTCTCCATGGTTTGGTGTGCATTTCCTCTCTCCTGTCCCCACTTGACACATCCATGTCCCAATCTCCCCCAACCTCAGGTCAACCGCCGCTACCCAAGATCCAGTCTCCGTTCTCCCTCTCCTCTCGCTTCATACACACCAGGGCGGCAGCGGCAGCGGCAGGGGCCCGCCATCACCAACCCACCTCCCTTCAATTATAAACCTATAAAATATCATCATTGACCCAAGCTGAGGCGACTAGTGGGTATTGATTTTTGGTGGGGCAGATCAAGGAGGGGGGGAGGGGGTTAACTTCCAAGGAACCAGTTCATTGCTGGTTCTGCTAGCAGGAGGTTGGATTTCAGAGGCAGAAGCTTTCAGCCAGGCGGGCTCAGGGCGCGGGCACATCAATGGCTGGCAAGGAAATCCTCCACAAGGTGAAGGACAAGGTGAAAGATGCATTTAGTTCATCAGGACCAGAAACAGGGAAAGGCAAGACAAAGTTATCAGGCAAGCGTGTCAAGCATGGTTACCATCTGGTGAAGGGCAAATCTAATCATCCAATGGAGGATTATCTAGTGGCAGAGTACCGGCAAGTTGGTGAACATGATTTGGGATTGTTTGCTATATTCGATGGTCACCTGGGCCACACTGTTCCAGACTTTTTGAGCTCCCATCTTTTCAATAACATCTTGAGTGAGCCAGAATTCTTGAGTGATCCAGAAACTGCTATCCGAAACGCATACCAACTTACGGATCAGAAGATATTGGAAAACGCAGCAGAGTTGGGAAGAGGTGGCTCCACAGCTGTTACTGCCATCTTAATAGGAAGTGACAAGTTCGTGAAACTAGTTGTTGCAAATGTTGGGGATTCACGGGCAGTTATTAGCAAGAACGGTGTAGCGAAGCAGCTTTCAGTTGACCATGAACCAAACATGGAGCGACAAACGATCGAGCAGAAGGGTGGCTTTGTATCAAACCTACCGGGTGATGTGCCACGTGTTGATGGGCAGCTGGCAGTTGCAAGGGCATTTGGAGACCGGAGCTTGAAGAAGCACCTCAGCTCTGATCCATATGTGGTCGAGCAAACTATCGATGAAAATACTGAGTTTTTAATTCTAGCAAGTGATGGCTTGTGGAAGGTGATGTCCAACCAGGAGGCTGTCGACGAGATCAAGGATTGCAAGGACGCGCAGGCAGCTGCCAAGCACCTGACGGAGCAGGCCGTGAATCGGAAGAGCAAAGACGACATTTCAGTTATCGTAGTCAAGTTCATGTGCTAGCACATCGTCAGGTTAAATGGTCTCCCGATTGTATACCGTGTTAAATTATCTTTTAAGTCTTGTGCTCGCTGGTGTCGGACATTTTGTTTACCTTCTTTGGTTTTGGGACCCCACAAAGAGGGTCAAGGCTTGTAACATATTGTTGTTTGTTTAAGGCTCCAAATAAAGCATGGTACCACCATAGTAATTTCAGTTCGTGTTCTTACA
MAGKEILHKVKDAFSSSGPETGKGKTKLSGKRVKHGYHLVKGKSNHPMEDYLVAEYRQVGEHDLGLFAIFDGHLGHTVPD
FLSSHLFNNILSEPEFLSDPETAIRNAYQLTDQKILENAAELGRGGSTAVTAILIGSDKFVKLVVANVGDSRAVISKNGV
AKQLSVDHEPNMERQTIEQKGGFVSNLPGDVPRVDGQLAVARAFGDRSLKKHLSSDPYVVEQTIDENTEFLILASDGLWK
VMSNQEAVDEIKDCKDAQAAAKHLTEQAVNRKSKDDISVIVVKFMC
ATCCTGGTCTAGCTTGTCGATCTCT...
ATCCTGGTCTAGCTTGTCGATCTCTCCTGTGAAACACGGAAAGGGAAGGCTGAAAAAACACGACGCTTTTTCTCCATGGTTTGGTGTGCATTTCCTCTCTCCTGTCCCCACTTGACACATCCATGTCCCAATCTCCCCCAACCTCAGGTCAACCGCCGCTACCCAAGATCCAGTCTCCGTTCTCCCTCTCCTCTCGCTTCATACACACCAGGGCGGCAGCGGCAGCGGCAGGGGCCCGCCATCACCAACCCACCTCCCTTCAATTATAAACCTATAAAATATCATCATTGACCCAAGCTGAGGCGACTAGTGGGTATTGATTTTTGGTGGGGCAGATCAAGGAGGGGGGGAGGGGGTTAACTTCCAAGGAACCAGTTCATTGCTGGTTCTGCTAGCAGGAGGTTGGATTTCAGAGGCAGAAGCTTTCAGCCAGGCGGGCTCAGGGCGCGGGCACATCAATGGCTGGCAAGGAAATCCTCCACAAGGTGAAAGATGCATTTAGTTCATCAGGACCAGAAACAGGGAAAGGCAAGACAAAGTTATCAGGCAAGCGTGTCAAGCATGGTTACCATCTGGTGAAGGGCAAATCTAATCATCCAATGGAGGATTATCTAGTGGCAGAGTACCGGCAAGTTGGTGAACATGATTTGGGATTGTTTGCTATATTCGATGGTCACCTGGGCCACACTGTTCCAGACTTTTTGAGCTCCCATCTTTTCAATAACATCTTGAGTGAGCCAGAATTCTTGAGTGATCCAGAAACTGCTATCCGAAACGCATACCAACTTACGGATCAGAAGATATTGGAAAACGCAGCAGAGTTGGGAAGAGGTGGCTCCACAGCTGTTACTGCCATCTTAATAGGAAGTGACAAGTTCGTGAAACTAGTTGTTGCAAATGTTGGGGATTCACGGGCAGTTATTAGCAAGAACGGTGTAGCGAAGCAGCTTTCAGTTGACCATGAACCAAACATGGAGCGACAAACGATCGAGCAGAAGGGTGGCTTTGTATCAAACCTACCGGGTGATGTGCCACGTGTTGATGGGCAGCTGGCAGTTGCAAGGGCATTTGGAGACCGGAGCTTGAAGAAGCACCTCAGCTCTGATCCATATGTGGTCGAGCAAACTATCGATGAAAATACTGAGTTTTTAATTCTAGCAAGTGATGGCTTGTGGAAGGTGATGTCCAACCAGGAGGCTGTCGACGAGATCAAGGATTGCAAGGACGCGCAGGCAGCTGCCAAGCACCTGACGGAGCAGGCCGTGAATCGGAAGAGCAAAGACGACATTTCAGTTATCGTAGTCAAGTTCATGTGCTAGCACATCGTCAGGTTAAATGGTCTCCCGATTGTATACCGTGTTAAATTATCTTTTAAGTCTTGTGCTCGCTGGTGTCGGACATTTTGTTTACCTTCTTTGGTTTTGGGACCCCACAAAGAGGGTCAAGGCTTGTAACATATTGTTGTTTGTTTAAGGCTCCAAATAAAGCATGGTACCACCATAGTAATTTCAGTTCGTGTTCTTAC
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